STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UYA_17455Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)    
Predicted Functional Partners:
UYA_17445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.970
UYA_17430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.968
UYA_17435
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.965
UYA_17440
DUF4129 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.963
UYA_17450
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.953
UYA_15495
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.723
UYA_11135
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.635
UYA_17425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
UYA_02300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.516
UYA_17785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
Your Current Organism:
Pseudomonas alcaliphila
NCBI taxonomy Id: 741155
Other names: P. alcaliphila JAB1, Pseudomonas alcaliphila JAB1, Pseudomonas alcaliphila str. JAB1, Pseudomonas alcaliphila strain JAB1, Pseudomonas sp. JAB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.