STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_6841IPPc domain-containing protein. (738 aa)    
Predicted Functional Partners:
BMF94_3743
Uncharacterized protein.
    
   0.872
BMF94_2817
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.695
BMF94_7111
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.640
BMF94_1179
PIPK domain-containing protein.
  
  
 0.637
BMF94_0730
Uncharacterized protein.
    
  0.635
BMF94_1015
AP-1 complex subunit gamma.
    
  0.617
BMF94_6823
SAC domain-containing protein.
    
0.600
BMF94_3470
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.593
BMF94_6804
SAC domain-containing protein.
    
 0.592
BMF94_6418
IPPc domain-containing protein.
    
0.592
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
Server load: low (14%) [HD]