STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_6656Ribosomal_L19e domain-containing protein. (195 aa)    
Predicted Functional Partners:
BMF94_7084
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
BMF94_7071
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.999
BMF94_7018
Putative Sucrose synthase.
   
 
 0.999
BMF94_7047
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 0.999
BMF94_6977
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.999
BMF94_6976
Uncharacterized protein.
  
 0.999
BMF94_6789
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.999
BMF94_6862
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
 
 
 0.999
BMF94_6684
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
BMF94_6668
Uncharacterized protein.
   
 
 0.999
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
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