STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_6529Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
BMF94_4553
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
 
 
 0.897
BMF94_3624
Uncharacterized protein.
    
 0.895
BMF94_4933
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.883
BMF94_5838
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
  
 
 0.876
BMF94_4859
Uncharacterized protein; Belongs to the arginase family.
  
 
 0.805
BMF94_4325
Uncharacterized protein.
    
 0.805
BMF94_1620
Arginase; Belongs to the arginase family.
  
 
 0.805
BMF94_7098
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.
    
 0.798
BMF94_1648
Aminotran_5 domain-containing protein.
    
 0.773
BMF94_1723
Ornithine aminotransferase.
  
 
 0.770
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.