STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_4690Rab-GAP TBC domain-containing protein. (882 aa)    
Predicted Functional Partners:
BMF94_0164
Uncharacterized protein.
    
 0.800
BMF94_4153
Putative Small monomeric GTPase.
    
 0.695
BMF94_5311
Uncharacterized protein.
    
 
 0.687
BMF94_3532
VPS9 domain-containing protein.
   
  0.590
BMF94_2098
Uncharacterized protein.
   
  0.590
BMF94_5604
Putative Small monomeric GTPase.
    
 0.582
BMF94_5603
Uncharacterized protein.
    
 0.582
BMF94_3892
Putative Small monomeric GTPase.
    
 0.582
BMF94_2398
Uncharacterized protein.
    
 0.582
BMF94_3432
BAR domain-containing protein.
    
 
 0.577
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.