STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_3224Uncharacterized protein. (374 aa)    
Predicted Functional Partners:
BMF94_0379
Putative Stearoyl-CoA 9-desaturase.
    
 0.715
BMF94_1192
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.664
BMF94_0285
Putative Ferredoxin--NADP(+) reductase, or putative Biotin synthase.
   
 0.664
BMF94_6897
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.641
BMF94_0505
FSH1 domain-containing protein.
   
 
 0.641
BMF94_4246
Putative D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase.
   
 0.623
BMF94_1719
Uncharacterized protein.
   
 0.623
BMF94_3245
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.605
BMF94_6115
Dihydrolipoyl dehydrogenase.
  
 0.589
BMF94_0249
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 0.585
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
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