STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_2497Uncharacterized protein. (565 aa)    
Predicted Functional Partners:
BMF94_5308
Uncharacterized protein.
    
 0.947
BMF94_6052
Uncharacterized protein.
   
 0.907
BMF94_5222
Crossover junction endonuclease MUS81.
    
 0.862
BMF94_6605
Putative 1,4-alpha-glucan branching enzyme.
   
 0.814
BMF94_6075
Putative Phosphoglucomutase (Alpha-D-glucose-1,6-bisphosphate-dependent); Belongs to the phosphohexose mutase family.
   
 0.709
BMF94_6642
A/B superfamily hydrolase.
  
 0.696
BMF94_6401
CBM21 domain-containing protein.
    
 0.684
BMF94_5384
Uncharacterized protein.
    
 0.684
BMF94_2536
Uncharacterized protein.
    
 0.676
BMF94_4426
Uncharacterized protein.
  
 0.675
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.