STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_2398Uncharacterized protein. (704 aa)    
Predicted Functional Partners:
BMF94_6995
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.906
BMF94_2572
FYVE-type domain-containing protein.
   
 0.906
BMF94_3578
Phosphatidylinositol 3-kinase VPS34.
    
 0.849
BMF94_2098
Uncharacterized protein.
    
 0.837
BMF94_3532
VPS9 domain-containing protein.
    
 0.836
BMF94_3084
Uncharacterized protein.
    
 0.807
BMF94_1549
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.772
BMF94_3802
Uncharacterized protein.
  
0.765
BMF94_6154
Putative Small monomeric GTPase.
  
0.744
BMF94_0164
Uncharacterized protein.
  
0.743
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.