STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_1553Peptidase_S9 domain-containing protein. (799 aa)    
Predicted Functional Partners:
BMF94_3120
WD_REPEATS_REGION domain-containing protein.
    
 0.628
BMF94_6957
Signal peptidase complex catalytic subunit SEC11.
   
 
 0.594
BMF94_4251
Uncharacterized protein.
    
   0.593
BMF94_6632
Peptidase_S24 domain-containing protein.
     
 0.517
BMF94_5666
Uncharacterized protein.
     
 0.517
BMF94_6620
Git3 domain-containing protein.
     
 0.485
BMF94_3544
Uncharacterized protein.
     
 0.485
BMF94_0730
Uncharacterized protein.
    
 0.460
BMF94_3582
Uncharacterized protein.
    
 0.439
BMF94_1320
GNAT family acetyltransferase.
    
 0.439
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.