STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_1282Uncharacterized protein. (324 aa)    
Predicted Functional Partners:
BMF94_4127
Uncharacterized protein.
 
  
 0.742
BMF94_7025
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.
    
  0.669
BMF94_4874
Uncharacterized protein.
  
 
  0.669
BMF94_4589
PRK domain-containing protein.
  
 
  0.669
BMF94_3121
Uncharacterized protein.
  
 
  0.669
BMF94_2548
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
 0.669
BMF94_1696
Uridine kinase; Belongs to the uridine kinase family.
  
 
  0.669
BMF94_4522
Uncharacterized protein.
 
  
 0.666
BMF94_6146
Putative NADH:ubiquinone reductase (H(+)-translocating).
  
 
  0.637
BMF94_5642
Fe-ADH domain-containing protein.
    
  0.618
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
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