STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_1158Putative Glycerol 2-dehydrogenase (NADP(+)). (305 aa)    
Predicted Functional Partners:
BMF94_5611
Putative Glycerone kinase.
   
 
 0.807
BMF94_4950
Uncharacterized protein; Belongs to the FGGY kinase family.
  
 
 0.765
BMF94_3710
Tryptophan synthase.
    
  0.755
BMF94_0617
Aldo_ket_red domain-containing protein.
  
  
 
0.736
BMF94_6338
Uncharacterized protein.
     
 0.732
BMF94_5920
Uncharacterized protein.
    
 0.699
BMF94_6464
S5A_REDUCTASE domain-containing protein.
   
 
 0.638
BMF94_1205
VOC domain-containing protein.
   
 0.633
BMF94_6761
GST C-terminal domain-containing protein.
    
 0.612
BMF94_2218
Uncharacterized protein.
   
  0.607
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.