STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMF94_0505FSH1 domain-containing protein. (284 aa)    
Predicted Functional Partners:
BMF94_0786
Flavoprotein domain-containing protein.
  
 
 0.988
BMF94_1485
Putative Thymidylate synthase.
  
 
 0.962
BMF94_2741
Putative Glycine hydroxymethyltransferase.
  
 
 0.892
BMF94_0200
Putative Methenyltetrahydrofolate cyclohydrolase.
  
 
 0.876
BMF94_6752
Thymidylate_kin domain-containing protein.
    
 0.870
BMF94_4164
Uncharacterized protein.
   
 
 0.852
BMF94_6743
Uncharacterized protein.
  
 
 0.841
BMF94_5041
Uncharacterized protein.
  
 
 0.841
BMF94_7041
Uncharacterized protein.
    
 0.821
BMF94_1144
Uncharacterized protein.
    
 0.821
Your Current Organism:
Rhodotorula taiwanensis
NCBI taxonomy Id: 741276
Other names: A1-01, BCRC 23118, CBS 11729, R. taiwanensis, Rhodotorula sp. BCRC 23118, Rhodotorula taiwanensis Lee & Huang 2011
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.