STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A2H3JB01Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (174 aa)    
Predicted Functional Partners:
A0A2H3K9N5
PRP3-domain-containing protein.
    
 0.951
A0A2H3JS64
U4/U6 snRNP-specific spliceosomal protein.
    
 0.947
A0A2H3J6J1
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.934
A0A2H3JRH0
Small nuclear ribonucleo protein SmF.
   
 0.931
A0A2H3JJB2
Small nuclear ribonucleoprotein Sm D3.
   
 0.894
A0A2H3JGA4
RanBD1 domain-containing protein.
 
 
   0.889
A0A2H3JBE0
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.885
A0A2H3JV40
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.865
A0A2H3J487
Small nuclear ribonucleoprotein Sm D2.
   
  0.852
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.844
Your Current Organism:
Wolfiporia cocos
NCBI taxonomy Id: 742152
Other names: W. cocos MD-104 SS10, Wolfiporia cocos MD-104, Wolfiporia cocos MD-104 SS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.