STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3JB23Transducin protein/WD-40 repeat protein. (569 aa)    
Predicted Functional Partners:
A0A2H3JD69
Ribosome biogenesis protein BRX1.
   
 
 0.994
A0A2H3JC51
Eukaryotic rRNA processing.
   
 
 0.993
A0A2H3JS86
Brix-domain-containing protein.
   
 
 0.990
A0A2H3JD54
RRM domain-containing protein.
   
 
 0.989
A0A2H3JDZ6
Ribosomal protein L1.
   
 
 0.989
A0A2H3K1U9
Noc2-domain-containing protein.
   
 
 0.987
A0A2H3IWV4
Nucleic acid-binding protein.
   
 
 0.985
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.975
A0A2H3JG69
Uncharacterized protein.
   
 
 0.973
A0A2H3JB94
WD40 repeat-like protein.
   
 
 0.972
Your Current Organism:
Wolfiporia cocos
NCBI taxonomy Id: 742152
Other names: W. cocos MD-104 SS10, Wolfiporia cocos MD-104, Wolfiporia cocos MD-104 SS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.