STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3JB45t-SNARE. (344 aa)    
Predicted Functional Partners:
A0A2H3IWT7
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.998
A0A2H3K4Z3
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 0.998
A0A2H3J3V4
Protein transport protein BET1.
   
 0.997
A0A2H3J8Q5
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.997
A0A2H3JN74
Protein transport protein Sec22; Belongs to the synaptobrevin family.
   
 0.997
A0A2H3IW96
Vesicular-fusion protein SEC17.
    
 0.994
A0A2H3JUP2
t-SNARE; Belongs to the syntaxin family.
    
 0.991
A0A2H3JQU3
t-SNARE coiled-coil homology domain-containing protein.
   
 0.990
A0A2H3ISK3
Vesicle transport v-snare protein vti1.
    
 0.989
A0A2H3J7K7
GTP-binding protein ypt1.
   
 0.989
Your Current Organism:
Wolfiporia cocos
NCBI taxonomy Id: 742152
Other names: W. cocos MD-104 SS10, Wolfiporia cocos MD-104, Wolfiporia cocos MD-104 SS10
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