A0A2H3JB48 protein (Wolfiporia cocos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2H3JB48

Uncharacterized protein. (215 aa)

Predicted Functional Partners:

A0A2H3IWW9

0.903

A0A2H3JZE9

0.678

A0A2H3JMN8

0.668

A0A2H3JPK4

0.650

A0A2H3JG30

0.620

A0A2H3J4C4

0.615

A0A2H3JJP1

0.615

A0A2H3IXM8

0.610

A0A2H3J172

0.610

A0A2H3JBP4

0.602

Your Current Organism:

Wolfiporia cocos

NCBI taxonomy Id: 742152
Other names: W. cocos MD-104 SS10, Wolfiporia cocos MD-104, Wolfiporia cocos MD-104 SS10

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2H3IWW9	A0A2H3J4C4	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.933
A0A2H3IWW9	A0A2H3JB48	Uncharacterized protein.	Uncharacterized protein.	0.903
A0A2H3IWW9	A0A2H3JBP4	Uncharacterized protein.	GRIP domain-containing protein.	0.762
A0A2H3IWW9	A0A2H3JJP1	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.933
A0A2H3IWW9	A0A2H3JMN8	Uncharacterized protein.	Uncharacterized protein.	0.804
A0A2H3IWW9	A0A2H3JPK4	Uncharacterized protein.	Growth factor receptor domain-containing protein.	0.632
A0A2H3IXM8	A0A2H3JB48	MRG-domain-containing protein.	Uncharacterized protein.	0.610
A0A2H3J172	A0A2H3JB48	PAPA-1 domain-containing protein.	Uncharacterized protein.	0.610
A0A2H3J4C4	A0A2H3IWW9	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.933
A0A2H3J4C4	A0A2H3JB48	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.615
A0A2H3J4C4	A0A2H3JBP4	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	GRIP domain-containing protein.	0.678
A0A2H3J4C4	A0A2H3JG30	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Mov34-domain-containing protein.	0.651
A0A2H3J4C4	A0A2H3JJP1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.801
A0A2H3J4C4	A0A2H3JMN8	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.816
A0A2H3JB48	A0A2H3IWW9	Uncharacterized protein.	Uncharacterized protein.	0.903
A0A2H3JB48	A0A2H3IXM8	Uncharacterized protein.	MRG-domain-containing protein.	0.610
A0A2H3JB48	A0A2H3J172	Uncharacterized protein.	PAPA-1 domain-containing protein.	0.610
A0A2H3JB48	A0A2H3J4C4	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.615
A0A2H3JB48	A0A2H3JBP4	Uncharacterized protein.	GRIP domain-containing protein.	0.602
A0A2H3JB48	A0A2H3JG30	Uncharacterized protein.	Mov34-domain-containing protein.	0.620