A0A2H3JB59 protein (Wolfiporia cocos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2H3JB59

FAD-binding FR-type domain-containing protein. (471 aa)

Predicted Functional Partners:

A0A2H3IWW9

0.803

A0A2H3JAA2

0.752

A0A2H3JH29

0.705

A0A2H3JHG3

0.635

A0A2H3IWG0

0.585

A0A2H3JPP3

0.585

A0A2H3J9N3

0.549

A0A2H3JGJ0

0.549

A0A2H3K0S2

0.549

A0A2H3JH90

0.548

Your Current Organism:

Wolfiporia cocos

NCBI taxonomy Id: 742152
Other names: W. cocos MD-104 SS10, Wolfiporia cocos MD-104, Wolfiporia cocos MD-104 SS10

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2H3IWG0	A0A2H3IWW9	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A2H3IWG0	A0A2H3J9N3	Uncharacterized protein.	Calmodulin; Belongs to the calmodulin family.	0.728
A0A2H3IWG0	A0A2H3JAA2	Uncharacterized protein.	Uncharacterized protein.	0.909
A0A2H3IWG0	A0A2H3JB59	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.585
A0A2H3IWG0	A0A2H3JGJ0	Uncharacterized protein.	DUF1348-domain-containing protein.	0.728
A0A2H3IWG0	A0A2H3JH29	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	0.465
A0A2H3IWG0	A0A2H3JHG3	Uncharacterized protein.	Uncharacterized protein.	0.979
A0A2H3IWG0	A0A2H3JPP3	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A2H3IWG0	A0A2H3K0S2	Uncharacterized protein.	EF-hand protein.	0.728
A0A2H3IWW9	A0A2H3IWG0	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A2H3IWW9	A0A2H3J9N3	Uncharacterized protein.	Calmodulin; Belongs to the calmodulin family.	0.816
A0A2H3IWW9	A0A2H3JAA2	Uncharacterized protein.	Uncharacterized protein.	0.840
A0A2H3IWW9	A0A2H3JB59	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.803
A0A2H3IWW9	A0A2H3JGJ0	Uncharacterized protein.	DUF1348-domain-containing protein.	0.816
A0A2H3IWW9	A0A2H3JH29	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	0.867
A0A2H3IWW9	A0A2H3JHG3	Uncharacterized protein.	Uncharacterized protein.	0.838
A0A2H3IWW9	A0A2H3JPP3	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A2H3IWW9	A0A2H3K0S2	Uncharacterized protein.	EF-hand protein.	0.816
A0A2H3J9N3	A0A2H3IWG0	Calmodulin; Belongs to the calmodulin family.	Uncharacterized protein.	0.728
A0A2H3J9N3	A0A2H3IWW9	Calmodulin; Belongs to the calmodulin family.	Uncharacterized protein.	0.816