STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3JBJ7RBR-type E3 ubiquitin transferase. (226 aa)    
Predicted Functional Partners:
A0A2H3IUB4
Ubiquitin.
    
 0.883
A0A2H3J7C5
AN1-type domain-containing protein.
    
 0.883
A0A2H3J3U2
Ubiquitin-domain-containing protein.
    
 0.879
A0A2H3JBR3
Ubiquitin-domain-containing protein.
    
 0.879
A0A2H3JVM0
Ubiquitin.
    
 0.879
A0A2H3IX37
Ubiquitin.
    
  0.875
A0A2H3JFT2
Uncharacterized protein.
    
  0.875
A0A2H3J677
RING/U-box.
    
 0.870
A0A2H3IW95
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.853
A0A2H3JEV8
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.853
Your Current Organism:
Wolfiporia cocos
NCBI taxonomy Id: 742152
Other names: W. cocos MD-104 SS10, Wolfiporia cocos MD-104, Wolfiporia cocos MD-104 SS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.