Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
K7IN98_NASVI | K7IUZ3_NASVI | K7IN98 | K7IUZ3 | Exonuclease domain-containing protein. | RRM domain-containing protein. | 0.445 |
K7IN98_NASVI | K7J4C1_NASVI | K7IN98 | K7J4C1 | Exonuclease domain-containing protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.445 |
K7IN98_NASVI | K7JDI0_NASVI | K7IN98 | K7JDI0 | Exonuclease domain-containing protein. | RRM domain-containing protein. | 0.445 |
K7IN98_NASVI | PAN3 | K7IN98 | K7J653 | Exonuclease domain-containing protein. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.802 |
K7IPC7_NASVI | K7IUZ3_NASVI | K7IPC7 | K7IUZ3 | Exonuclease domain-containing protein. | RRM domain-containing protein. | 0.445 |
K7IPC7_NASVI | K7J4C1_NASVI | K7IPC7 | K7J4C1 | Exonuclease domain-containing protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.445 |
K7IPC7_NASVI | K7JDI0_NASVI | K7IPC7 | K7JDI0 | Exonuclease domain-containing protein. | RRM domain-containing protein. | 0.445 |
K7IPC7_NASVI | K7JF24_NASVI | K7IPC7 | K7JF24 | Exonuclease domain-containing protein. | C3H1-type domain-containing protein. | 0.903 |
K7IPC7_NASVI | PAN3 | K7IPC7 | K7J653 | Exonuclease domain-containing protein. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.802 |
K7IUZ3_NASVI | K7IN98_NASVI | K7IUZ3 | K7IN98 | RRM domain-containing protein. | Exonuclease domain-containing protein. | 0.445 |
K7IUZ3_NASVI | K7IPC7_NASVI | K7IUZ3 | K7IPC7 | RRM domain-containing protein. | Exonuclease domain-containing protein. | 0.445 |
K7IUZ3_NASVI | K7IZH5_NASVI | K7IUZ3 | K7IZH5 | RRM domain-containing protein. | Uncharacterized protein. | 0.763 |
K7IUZ3_NASVI | K7J083_NASVI | K7IUZ3 | K7J083 | RRM domain-containing protein. | Uncharacterized protein. | 0.445 |
K7IUZ3_NASVI | K7JF24_NASVI | K7IUZ3 | K7JF24 | RRM domain-containing protein. | C3H1-type domain-containing protein. | 0.445 |
K7IUZ3_NASVI | PAN3 | K7IUZ3 | K7J653 | RRM domain-containing protein. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.791 |
K7IZH5_NASVI | K7IUZ3_NASVI | K7IZH5 | K7IUZ3 | Uncharacterized protein. | RRM domain-containing protein. | 0.763 |
K7IZH5_NASVI | K7J4C1_NASVI | K7IZH5 | K7J4C1 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.965 |
K7IZH5_NASVI | K7JDI0_NASVI | K7IZH5 | K7JDI0 | Uncharacterized protein. | RRM domain-containing protein. | 0.763 |
K7IZH5_NASVI | K7JME5_NASVI | K7IZH5 | K7JME5 | Uncharacterized protein. | Uncharacterized protein. | 0.707 |
K7IZH5_NASVI | PAN3 | K7IZH5 | K7J653 | Uncharacterized protein. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.999 |
page 1 of 3