K7JQL2_NASVI protein (Nasonia vitripennis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K7JQL2_NASVI

RRM domain-containing protein. (355 aa)

Predicted Functional Partners:

K7IZ67_NASVI

0.837

K7J9Y1_NASVI

0.808

K7J386_NASVI

0.788

K7JAL1_NASVI

0.772

K7IWB3_NASVI

0.771

K7ITH8_NASVI

0.767

K7J2V8_NASVI

0.758

K7IM03_NASVI

0.741

K7J486_NASVI

0.738

K7IVJ0_NASVI

0.688

Your Current Organism:

Nasonia vitripennis

NCBI taxonomy Id: 7425
Other names: N. vitripennis, jewel wasp

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K7IM03_NASVI	K7ITH8_NASVI	K7IM03	K7ITH8	Brix domain-containing protein.	Brix domain-containing protein.	0.996
K7IM03_NASVI	K7IVJ0_NASVI	K7IM03	K7IVJ0	Brix domain-containing protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.978
K7IM03_NASVI	K7IWB3_NASVI	K7IM03	K7IWB3	Brix domain-containing protein.	Uncharacterized protein.	0.997
K7IM03_NASVI	K7IZ67_NASVI	K7IM03	K7IZ67	Brix domain-containing protein.	Brix domain-containing protein.	0.934
K7IM03_NASVI	K7J2V8_NASVI	K7IM03	K7J2V8	Brix domain-containing protein.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.997
K7IM03_NASVI	K7J386_NASVI	K7IM03	K7J386	Brix domain-containing protein.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.991
K7IM03_NASVI	K7J486_NASVI	K7IM03	K7J486	Brix domain-containing protein.	Uncharacterized protein.	0.991
K7IM03_NASVI	K7J9Y1_NASVI	K7IM03	K7J9Y1	Brix domain-containing protein.	Uncharacterized protein.	0.999
K7IM03_NASVI	K7JAL1_NASVI	K7IM03	K7JAL1	Brix domain-containing protein.	RRM domain-containing protein.	0.998
K7IM03_NASVI	K7JQL2_NASVI	K7IM03	K7JQL2	Brix domain-containing protein.	RRM domain-containing protein.	0.741
K7ITH8_NASVI	K7IM03_NASVI	K7ITH8	K7IM03	Brix domain-containing protein.	Brix domain-containing protein.	0.996
K7ITH8_NASVI	K7IVJ0_NASVI	K7ITH8	K7IVJ0	Brix domain-containing protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.974
K7ITH8_NASVI	K7IWB3_NASVI	K7ITH8	K7IWB3	Brix domain-containing protein.	Uncharacterized protein.	0.984
K7ITH8_NASVI	K7IZ67_NASVI	K7ITH8	K7IZ67	Brix domain-containing protein.	Brix domain-containing protein.	0.988
K7ITH8_NASVI	K7J2V8_NASVI	K7ITH8	K7J2V8	Brix domain-containing protein.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.965
K7ITH8_NASVI	K7J386_NASVI	K7ITH8	K7J386	Brix domain-containing protein.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.998
K7ITH8_NASVI	K7J486_NASVI	K7ITH8	K7J486	Brix domain-containing protein.	Uncharacterized protein.	0.975
K7ITH8_NASVI	K7J9Y1_NASVI	K7ITH8	K7J9Y1	Brix domain-containing protein.	Uncharacterized protein.	0.995
K7ITH8_NASVI	K7JAL1_NASVI	K7ITH8	K7JAL1	Brix domain-containing protein.	RRM domain-containing protein.	0.997
K7ITH8_NASVI	K7JQL2_NASVI	K7ITH8	K7JQL2	Brix domain-containing protein.	RRM domain-containing protein.	0.767