Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGG80281.1Hypothetical protein. (465 aa)    
Predicted Functional Partners:
EGG83180.1
Arginase; Belongs to the arginase family.
 
 
 0.919
EGG80280.1
Hypothetical protein.
       0.815
EGG84896.1
Hypothetical protein.
 
   
 0.754
EGG80277.1
Hypothetical protein.
  
    0.729
EGG80278.1
Hypothetical protein.
  
    0.714
EGG80279.1
DNA polymerase III, subunit gamma and tau.
       0.706
rsmI
Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.697
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.558
EGG79763.1
Hypothetical protein.
   
 
 0.557
EGG83579.1
Hypothetical protein.
   
 
 0.557
Your Current Organism:
Lachnospiraceae bacterium 2146FAA
NCBI taxonomy Id: 742723
Other names: L. bacterium 2_1_46FAA, Lachnospiraceae bacterium 2_1_46FAA
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