STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ66054.1Hypothetical protein. (440 aa)    
Predicted Functional Partners:
EJZ66050.1
Hypothetical protein; Belongs to the peptidase S14 family.
 
     0.795
EJZ65956.1
PBSX family phage terminase, large subunit.
 
     0.781
EJZ66045.1
Hypothetical protein.
 
     0.778
EJZ66004.1
Hypothetical protein.
  
    0.776
EJZ66011.1
Hypothetical protein.
  
     0.774
EJZ66040.1
Phage tail tape measure protein, TP901 family, core region.
  
    0.774
EJZ66010.1
Hypothetical protein.
  
     0.769
EJZ65999.1
Hypothetical protein.
  
     0.768
EJZ65955.1
Hypothetical protein.
  
     0.764
EJZ65951.1
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.763
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.