STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ66187.1Hypothetical protein. (310 aa)    
Predicted Functional Partners:
EJZ66186.1
RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily.
 
   0.850
EJZ66505.1
RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.796
EJZ66188.1
SusC/RagA family TonB-linked outer membrane protein.
 
     0.700
EJZ62045.1
RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.692
EJZ66189.1
Hypothetical protein.
 
     0.627
EJZ66508.1
Hypothetical protein.
  
     0.620
EJZ64924.1
RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.584
EJZ66319.1
Hypothetical protein.
  
     0.570
EJZ63906.1
Hypothetical protein.
  
     0.556
EJZ62034.1
RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.555
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.