STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ66321.1Hypothetical protein. (850 aa)    
Predicted Functional Partners:
EJZ65166.1
Por secretion system C-terminal sorting domain-containing protein.
   
 0.895
EJZ62861.1
Hypothetical protein.
   
 
 0.762
EJZ66317.1
Hypothetical protein.
    
 0.724
EJZ66320.1
SusC/RagA family TonB-linked outer membrane protein.
       0.718
EJZ66319.1
Hypothetical protein.
    
  0.708
EJZ66318.1
Hypothetical protein.
  
    0.656
EJZ64882.1
Shikimate 5-dehydrogenase.
     
 0.645
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
    
  0.626
EJZ65185.1
Hypothetical protein.
   
 
 0.621
EJZ65136.1
Hypothetical protein.
    
 0.618
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.