STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ66353.1Hypothetical protein. (414 aa)    
Predicted Functional Partners:
coaX
Pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.791
EJZ64211.1
Hypothetical protein.
  
     0.755
EJZ62903.1
Hypothetical protein.
  
     0.752
EJZ62416.1
Hypothetical protein.
  
    0.747
EJZ61919.1
Hypothetical protein.
 
     0.739
EJZ64812.1
Hypothetical protein.
  
     0.716
EJZ64873.1
Outer membrane assembly lipoprotein YfiO.
 
   
 0.716
EJZ62477.1
Hypothetical protein.
  
   
 0.715
EJZ66342.1
Hypothetical protein.
 
     0.712
EJZ64519.1
Hypothetical protein.
  
     0.697
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.