STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ66451.1Hypothetical protein. (420 aa)    
Predicted Functional Partners:
EJZ66452.1
Hypothetical protein.
 
  0.940
EJZ66450.1
Hypothetical protein.
 
 
  0.939
EJZ63003.1
Hypothetical protein.
 
 0.771
EJZ64189.1
Alpha-glucan phosphorylase.
 
 0.734
EJZ64190.1
Hypothetical protein.
  
  
  0.723
EJZ65385.1
Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
  
 0.719
EJZ62760.1
Hypothetical protein.
   
 
 0.633
EJZ62029.1
Hypothetical protein.
  
     0.547
EJZ64636.1
Hypothetical protein.
  
 
 0.535
EJZ66449.1
Hypothetical protein.
       0.422
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.