STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ66504.1Hypothetical protein; Belongs to the glycosyl hydrolase 2 family. (683 aa)    
Predicted Functional Partners:
EJZ64283.1
Hypothetical protein.
   
  0.692
EJZ65936.1
Hypothetical protein.
 
  
  0.636
EJZ63922.1
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
  
     0.620
EJZ62928.1
Hypothetical protein.
 
 
 0.608
EJZ66503.1
Hypothetical protein.
       0.538
EJZ63917.1
Hypothetical protein.
 
  0.511
EJZ63257.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.493
EJZ62986.1
Hypothetical protein.
  
 
 0.493
EJZ66505.1
RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily.
       0.476
EJZ62936.1
Hypothetical protein.
 
 
 0.475
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.