STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ66505.1RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)    
Predicted Functional Partners:
EJZ66506.1
Hypothetical protein.
 
   0.942
EJZ66508.1
Hypothetical protein.
 
   0.865
EJZ65931.1
Hypothetical protein.
  
   0.803
EJZ64923.1
Hypothetical protein.
  
   0.803
EJZ62876.1
Hypothetical protein.
 
   0.803
EJZ62180.1
Hypothetical protein.
  
   0.803
EJZ64641.1
Hypothetical protein.
  
   0.802
EJZ62035.1
Hypothetical protein.
  
   0.802
EJZ62046.1
Hypothetical protein.
  
   0.802
EJZ61982.1
Hypothetical protein.
 
   0.800
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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