STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ65099.1SusC/RagA family TonB-linked outer membrane protein. (983 aa)    
Predicted Functional Partners:
EJZ65098.1
Hypothetical protein.
 
     0.937
EJZ65097.1
Hypothetical protein.
 
     0.913
EJZ65228.1
Hypothetical protein.
 
 
   0.801
EJZ64618.1
Hypothetical protein.
 
 
   0.771
EJZ66349.1
Hypothetical protein.
 
 
   0.770
EJZ64643.1
Hypothetical protein.
  
 
   0.767
EJZ65840.1
Hypothetical protein; Belongs to the glycosyl hydrolase 13 family.
  
     0.751
EJZ65933.1
Hypothetical protein.
  
     0.712
EJZ66253.1
Hypothetical protein.
 
     0.702
EJZ66510.1
Hypothetical protein.
  
     0.690
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.