STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ65114.1Hypothetical protein. (485 aa)    
Predicted Functional Partners:
EJZ64873.1
Outer membrane assembly lipoprotein YfiO.
   
 
 0.679
EJZ66206.1
Hypothetical protein.
  
 
 0.654
EJZ64527.1
Hypothetical protein.
  
   0.649
EJZ63328.1
Outer membrane protein assembly complex, YaeT protein.
  
   0.649
EJZ62950.1
Hypothetical protein.
  
   0.649
EJZ62483.1
Hypothetical protein.
  
   0.649
EJZ65113.1
Hypothetical protein.
       0.578
EJZ61876.1
Hypothetical protein.
    
   0.532
EJZ65112.1
Hypothetical protein.
       0.442
EJZ65111.1
Hypothetical protein.
       0.418
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.