STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ65221.1Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family. (333 aa)    
Predicted Functional Partners:
EJZ65224.1
Methanosarcina family methyltransferase cognate corrinoid protein.
 
 
 0.844
EJZ65226.1
MtaA/CmuA family methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
 
  
  0.839
EJZ65222.1
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    
0.811
EJZ65220.1
Por secretion system C-terminal sorting domain-containing protein.
       0.737
EJZ63261.1
Hypothetical protein.
  
 
 0.690
EJZ65225.1
Hypothetical protein.
     
 0.488
EJZ64549.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
   
 0.466
EJZ65223.1
Hypothetical protein.
       0.463
EJZ61923.1
Hypothetical protein.
  
 
 0.417
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.