STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ65226.1MtaA/CmuA family methyltransferase; Belongs to the uroporphyrinogen decarboxylase family. (328 aa)    
Predicted Functional Partners:
EJZ65224.1
Methanosarcina family methyltransferase cognate corrinoid protein.
 
 0.943
EJZ65225.1
Hypothetical protein.
 
  
 0.872
EJZ65221.1
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
  
  0.839
EJZ65223.1
Hypothetical protein.
       0.741
EJZ63261.1
Hypothetical protein.
  
 
 0.690
EJZ65222.1
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.671
EJZ61923.1
Hypothetical protein.
  
 
 0.638
EJZ64655.1
Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
 
 0.632
EJZ63887.1
Hypothetical protein.
  
     0.529
EJZ63924.1
Hypothetical protein.
 
     0.481
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.