STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ64596.1Sigma-70 family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (186 aa)    
Predicted Functional Partners:
EJZ64595.1
Hypothetical protein.
       0.773
EJZ63187.1
Sigma-70 family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.770
EJZ66155.1
Sigma-70 family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.761
EJZ62875.1
RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.745
EJZ62181.1
RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.742
EJZ66492.1
Sigma-70 family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.738
EJZ65930.1
RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.695
EJZ64223.1
Sigma-70 family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.670
EJZ62034.1
RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.659
EJZ61981.1
RNA polymerase sigma-70 factor, expansion family 1; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.658
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.