STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ64873.1Outer membrane assembly lipoprotein YfiO. (266 aa)    
Predicted Functional Partners:
EJZ63328.1
Outer membrane protein assembly complex, YaeT protein.
 
 
 0.930
EJZ64874.1
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
 
 
 0.914
EJZ64527.1
Hypothetical protein.
 
 
 0.886
EJZ62477.1
Hypothetical protein.
 
  
 0.825
EJZ61919.1
Hypothetical protein.
  
     0.757
EJZ63327.1
Hypothetical protein.
 
   
 0.756
EJZ62774.1
Hypothetical protein.
  
   
 0.755
EJZ62483.1
Hypothetical protein.
 
 
 0.755
EJZ64847.1
Hypothetical protein.
 
   
 0.749
EJZ63331.1
Hypothetical protein.
  
 
 0.735
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.