STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ64921.1SusC/RagA family TonB-linked outer membrane protein; Overlaps another CDS with the same product name. (530 aa)    
Predicted Functional Partners:
EJZ64922.1
SusC/RagA family TonB-linked outer membrane protein; Overlaps another CDS with the same product name.
    0.993
EJZ64920.1
Hypothetical protein.
 
     0.944
EJZ65182.1
Hypothetical protein.
  
     0.774
EJZ62176.1
Hypothetical protein.
  
     0.774
EJZ64643.1
Hypothetical protein.
  
     0.773
EJZ62941.1
Hypothetical protein.
  
     0.772
EJZ62048.1
Hypothetical protein.
  
     0.769
EJZ62037.1
Hypothetical protein.
  
     0.764
EJZ66510.1
Hypothetical protein.
  
     0.746
EJZ62926.1
Hypothetical protein.
  
     0.746
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.