STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ64948.1Hypothetical protein. (300 aa)    
Predicted Functional Partners:
EJZ64950.1
Hypothetical protein.
 
     0.858
EJZ64949.1
Hypothetical protein.
       0.684
EJZ64947.1
Hypothetical protein.
      
0.678
EJZ63386.1
Hypothetical protein.
  
     0.581
EJZ65135.1
Hypothetical protein.
  
     0.562
EJZ66409.1
Hypothetical protein.
  
     0.556
EJZ66392.1
Hypothetical protein.
  
     0.543
EJZ63241.1
Hypothetical protein.
  
     0.531
EJZ63243.1
Hypothetical protein.
  
     0.479
EJZ63242.1
Excisionase family DNA binding domain-containing protein.
  
     0.473
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.