STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63728.1Hypothetical protein. (248 aa)    
Predicted Functional Partners:
EJZ63727.1
Hypothetical protein.
 
 0.998
EJZ64885.1
Hypothetical protein.
 
 0.976
EJZ63729.1
Hypothetical protein.
 
  
  0.807
EJZ65418.1
Hypothetical protein.
  
 
 0.652
EJZ63295.1
Hypothetical protein.
  
 
 0.652
EJZ63297.1
Hypothetical protein.
  
 
 0.652
EJZ62979.1
Hypothetical protein.
  
     0.605
EJZ63736.1
Cell division ATP-binding protein FtsE.
   
 
  0.576
EJZ62508.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
    0.508
EJZ63328.1
Outer membrane protein assembly complex, YaeT protein.
 
     0.496
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.