STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63788.1Hypothetical protein; Belongs to the bacterial histone-like protein family. (384 aa)    
Predicted Functional Partners:
EJZ63789.1
Hypothetical protein; Belongs to the bacterial histone-like protein family.
 
     0.830
EJZ62994.1
Hypothetical protein.
  
     0.710
EJZ66149.1
Hypothetical protein.
  
     0.613
EJZ61922.1
Hypothetical protein.
  
     0.613
EJZ64908.1
Hypothetical protein.
  
     0.612
EJZ65842.1
Hypothetical protein.
  
     0.610
EJZ63331.1
Hypothetical protein.
  
    0.583
EJZ64810.1
Hypothetical protein.
 
     0.579
cas1
CRISPR-associated endonuclease cas1, subtype II/nmeni; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
    
   0.576
EJZ64238.1
Hypothetical protein.
  
     0.558
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.