STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63850.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
EJZ63847.1
Hypothetical protein.
 
    0.810
EJZ63852.1
Hypothetical protein.
 
 
  0.806
EJZ63846.1
Hypothetical protein.
  
    0.782
EJZ63849.1
Hypothetical protein.
  
    0.782
EJZ63851.1
Hypothetical protein.
  
    0.782
EJZ63854.1
Hypothetical protein.
  
    0.780
EJZ61933.1
Hypothetical protein.
 
 
  0.777
EJZ63848.1
Hypothetical protein.
       0.773
EJZ63853.1
Hypothetical protein.
       0.773
EJZ62374.1
Hypothetical protein.
  
     0.772
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.