STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63855.1Capsular exopolysaccharide family protein. (803 aa)    
Predicted Functional Partners:
EJZ66240.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
 
 0.998
EJZ63856.1
Hypothetical protein.
 
 0.997
EJZ65974.1
Hypothetical protein.
 
 0.989
EJZ66169.1
Hypothetical protein.
 
 0.989
EJZ64505.1
Hypothetical protein.
 
 0.989
EJZ66236.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.958
nuoD
Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
     
 0.952
EJZ64635.1
Hypothetical protein.
  
 
 0.879
EJZ62824.1
Hypothetical protein.
 
  
 0.839
EJZ65971.1
Hypothetical protein.
 
  
 0.838
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.