STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63906.1Hypothetical protein. (607 aa)    
Predicted Functional Partners:
EJZ63905.1
SusC/RagA family TonB-linked outer membrane protein.
 
     0.946
EJZ63907.1
SusC/RagA family TonB-linked outer membrane protein.
 
     0.925
EJZ63903.1
Hypothetical protein.
 
     0.910
EJZ63902.1
Por secretion system C-terminal sorting domain-containing protein.
 
   0.907
EJZ63900.1
Hypothetical protein.
 
  
  0.861
EJZ65159.1
Hypothetical protein.
  
 
   0.813
EJZ66189.1
Hypothetical protein.
  
 
   0.807
EJZ64588.1
Hypothetical protein.
  
 
   0.806
EJZ66188.1
SusC/RagA family TonB-linked outer membrane protein.
  
 
   0.801
EJZ64587.1
SusC/RagA family TonB-linked outer membrane protein.
  
 
   0.796
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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