STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63935.1Hypothetical protein. (236 aa)    
Predicted Functional Partners:
EJZ63936.1
Hypothetical protein.
 
     0.803
EJZ63934.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.775
EJZ63933.1
C-terminal processing peptidase; Belongs to the peptidase S41A family.
       0.773
EJZ65205.1
Hypothetical protein.
  
     0.766
EJZ63389.1
Hypothetical protein.
  
     0.729
EJZ62768.1
Hypothetical protein.
  
     0.725
EJZ63778.1
Hypothetical protein.
  
     0.710
EJZ63387.1
Hypothetical protein.
  
     0.700
EJZ63932.1
Hypothetical protein.
       0.698
EJZ62029.1
Hypothetical protein.
  
     0.679
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.