STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63165.1Hypothetical protein. (387 aa)    
Predicted Functional Partners:
EJZ65129.1
Hypothetical protein.
 
  
 0.748
EJZ66323.1
Hypothetical protein.
  
 
 0.694
EJZ65869.1
Hypothetical protein.
  
 
 0.669
EJZ64624.1
Hypothetical protein.
  
 
  0.659
EJZ63164.1
RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.638
EJZ63163.1
Hypothetical protein.
       0.610
EJZ63167.1
Competence protein ComEA helix-hairpin-helix repeat region.
       0.580
EJZ63168.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase.
       0.575
EJZ63166.1
Hypothetical protein.
       0.574
EJZ63162.1
Hypothetical protein.
       0.524
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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