STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63218.1TraG family conjugation system ATPase. (799 aa)    
Predicted Functional Partners:
EJZ63219.1
Hypothetical protein.
 
   
 0.950
EJZ63220.1
Hypothetical protein.
 
   
 0.950
EJZ63213.1
Conjugative transposon TraK protein.
 
 
 0.872
EJZ63224.1
Hypothetical protein.
 
     0.866
EJZ63214.1
Conjugative transposon TraJ protein.
 
   
 0.814
EJZ63227.1
Hypothetical protein.
 
  
 0.805
EJZ63210.1
Conjugative transposon TraN protein.
 
   
 0.802
EJZ63215.1
Hypothetical protein.
 
   
 0.791
EJZ63226.1
Hypothetical protein.
 
     0.782
EJZ63211.1
Conjugative transposon TraM protein.
 
   
 0.778
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.