STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63238.1Hypothetical protein. (523 aa)    
Predicted Functional Partners:
EJZ63235.1
Hypothetical protein.
 
   
 0.900
EJZ63236.1
Hypothetical protein.
 
     0.896
EJZ63237.1
DNA topoisomerase III.
 
 
 
 0.833
EJZ63240.1
Excisionase family DNA binding domain-containing protein.
 
     0.791
EJZ63211.1
Conjugative transposon TraM protein.
 
     0.775
EJZ63230.1
Hypothetical protein.
 
     0.775
EJZ63207.1
Hypothetical protein.
  
     0.774
EJZ63209.1
Hypothetical protein.
  
    0.773
EJZ63222.1
Hypothetical protein.
  
     0.773
EJZ63225.1
Hypothetical protein.
 
     0.773
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.