STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ63272.1Hydrogenase accessory protein HypB. (249 aa)    
Predicted Functional Partners:
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.988
EJZ63276.1
Hydrogenase expression/formation protein HypD.
 
  
 0.962
EJZ63274.1
Carbamoyltransferase HypF.
 
   
 0.953
EJZ63275.1
Hydrogenase assembly chaperone HypC/HupF.
 
  
 0.953
EJZ63277.1
Hydrogenase expression/formation protein HypE.
 
  
 0.926
EJZ63279.1
Hypothetical protein.
 
  
 0.807
EJZ63278.1
Hydrogenase (NiFe) small subunit (hydA).
 
  
 0.784
EJZ63281.1
Hydrogenase maturation protease.
 
  
 0.778
EJZ63271.1
Hypothetical protein.
     
 0.777
EJZ66416.1
Hypothetical protein.
    
 
 0.753
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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