STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypAHydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (116 aa)    
Predicted Functional Partners:
EJZ63272.1
Hydrogenase accessory protein HypB.
 
 
 0.988
EJZ63279.1
Hypothetical protein.
 
 
 0.962
EJZ63274.1
Carbamoyltransferase HypF.
 
   
 0.953
EJZ63276.1
Hydrogenase expression/formation protein HypD.
 
  
 0.923
EJZ63277.1
Hydrogenase expression/formation protein HypE.
 
  
 0.920
EJZ63275.1
Hydrogenase assembly chaperone HypC/HupF.
 
  
 0.849
EJZ63278.1
Hydrogenase (NiFe) small subunit (hydA).
 
  
 0.847
EJZ63281.1
Hydrogenase maturation protease.
 
  
 0.844
EJZ63271.1
Hypothetical protein.
       0.716
EJZ63280.1
Ni/Fe-hydrogenase, b-type cytochrome subunit.
 
   
 0.713
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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