STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asnAAspartate-ammonia ligase. (344 aa)    
Predicted Functional Partners:
EJZ65089.1
Aspartate kinase.
   
 
  0.676
EJZ62365.1
Asparagine synthase (glutamine-hydrolyzing).
   
 
 0.666
EJZ63773.1
Carbamoyl-phosphate synthase, large subunit.
     
 0.643
EJZ62909.1
Argininosuccinate synthase.
   
 
  0.611
EJZ65412.1
Hypothetical protein.
     
 0.601
EJZ64679.1
Aspartate 4-decarboxylase.
     
 0.601
EJZ63744.1
Hypothetical protein.
     
 0.601
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.601
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.601
EJZ63952.1
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
    
  0.512
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.