STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ62768.1Hypothetical protein. (291 aa)    
Predicted Functional Partners:
EJZ62766.1
Hypothetical protein.
 
     0.798
EJZ63337.1
Hypothetical protein.
  
     0.746
rsmI
Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.744
EJZ63935.1
Hypothetical protein.
  
     0.725
EJZ62029.1
Hypothetical protein.
  
     0.724
EJZ65205.1
Hypothetical protein.
  
     0.706
EJZ64527.1
Hypothetical protein.
  
     0.697
EJZ64624.1
Hypothetical protein.
    
  0.685
EJZ63263.1
Hypothetical protein.
  
     0.664
EJZ64236.1
Hypothetical protein.
  
     0.652
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.