STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ62824.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
EJZ63855.1
Capsular exopolysaccharide family protein.
 
  
 0.839
EJZ64506.1
Capsular exopolysaccharide family protein.
 
  
 0.837
EJZ66168.1
Capsular exopolysaccharide family protein.
 
  
 0.836
EJZ65973.1
Capsular exopolysaccharide family protein.
 
  
 0.835
EJZ62825.1
Hypothetical protein.
       0.687
EJZ62826.1
Hypothetical protein.
       0.686
EJZ66240.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.610
EJZ64505.1
Hypothetical protein.
 
     0.566
EJZ65974.1
Hypothetical protein.
 
     0.560
EJZ64507.1
Hypothetical protein.
  
 
 0.557
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.